" ); include_once("analyticstracking.php"); ?>

About

The SWATHAtlas at the Institute for Systems Biology is a resource for planning your DIA/SWATH™ experiments, depositing published experimental high-quality spectral assay libraries, and exploring the results of these uploaded datasets.

The SWATHAtlas project makes available spectral libraries that are designed to aid in SWATH™ data processing for several species. It enables the ability to query and explore a set of seed datasets on-line, custom analysis of SWATH™ datasets in the repository. Users have the option to analyze and repair spectral ion libraries using the DIALib-QC tool.

Explore

Download Library Customize Library Upload Library Assess Library

Current Libraries

[ View / Download ]

News

"2023-07-14", text=> "DIA Pan human library (DPHL v1) in Orbtrap QE released", url=> "https://www.sciencedirect.com/science/article/pii/S2666389923001472?via%3Dihub", link=> "Xue, Z. et al. 2023" ), array(date=> "2023-06-12", text=> "Halobacterium library released", url=> "https://www.nature.com/articles/s41597-023-02590-5", link=> "Kusebauch, U et al. 2023" ), array(date=> "2021-06-27", text=> "Chinese hamster ovary (CHO) spectral library released", url=> "https://www.nature.com/articles/s41597-020-00594-z", link=> "Sim, K. et al. 2020" ), array(date=> "2021-06-08", text=> "DIA Pan human library (DPHL v1) in Orbtrap QE released", url=> "https://www.sciencedirect.com/science/article/pii/S1672022920300930", link=> "Zhu, T. et al. 2020" ), array(date=> "2020-10-16", text=> "DIALib-QC ion-library assessment tool published", url=> "https://doi.org/10.1038/s41467-020-18901-y", link=> "Midha, M et al. 2020" ), array(date=> "2020-09-29", text=> "HumanTcell2020 released", url=> "https://www.nature.com/articles/s41597-020-00744-3", link=> "Weerakoon, H et al. 2020" ), array(date=> "2020-09-15", text=> "Ecoli SWATH assay library released", url=> "https://www.nature.com/articles/s41597-020-00724-7", link=> "Midha, M et al. 2020" ), array(date=> "2020-06-18", text=> "Comprehensive mouse reference spectral library", url=> "https://dmm.biologists.org/content/13/7/dmm044586", link=> "Kransy, L et al. 2020" ), array(date=> "2019-11-08", text=> "DIALib-QC ion-library assessment tool released" ), array(date=> "2018-05-29", text=> "Mouse MHC Class I Immunopeptidome released", url=> "https://www.nature.com/articles/sdata2018157", link=> "Schuster, H. et al. 2018" ), array(date=> "2017-09-07", text=> "Staphylococcus aureus HG001 SWATH libraries released", url=> "https://www.nature.com/articles/s41598-017-10059-w", link=> "Michalik, S. et al. 2017" ), array(date=> "2016-03-06", text=> "Human breast cancer SWATH libraries released", url=> "https://www.cell.com/cell-reports/pdf/S2211-1247(19)30819-8.pdf", link=> "Bouchal, P. et al. 2019" ), array(date=> "2015-07-14", text=> "Human HLA immunoproteome SWATH libraries released", url=> "https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4507788/", link=> "Caron, E et al. 2015" ), array(date=> "2015-05-04", text=> "Comprehensive M tuberculosis SWATH library released", url=> "https://www.sciencedirect.com/science/article/pii/S1931312813001509?via%3Dihub", link=> "Schubert, O. et al. 2013" ), array(date=> "2014-08-06", text=> "Over Human 10,000 protein SWATH library released", url=> "https://www.nature.com/articles/sdata201431", link=> "Rosenberger, G. et al. 2014"), array(date=> "2014-04-08", text=> "Dr. Samuel Bader presents SWATH Atlas at US HUPO in Seattle." ), array(date=> "2014-04-04", text=> "Mtb SWATH libraries based on Mtb SRM Atlas data released", url=> "http://www.cell.com/cell-host-microbe/abstract/S1931-3128(13)00150-9'", link=> "Schubert, O. et al. 2013" ), array(date=> "2014-04-01", text=> "SWATHAtlas.org website launched" ), ); foreach($news as $item) { echo( "
$item[date]
$item[text]" ); if($item[url] != null) { echo( " [$item[link]]" ); } echo( "
" ); } ?>

Publications

A publication describing the SWATHAtlas is in progress. For now, please use the reference URL swathatlas.org for citing, and check back later for its publication.